All functions

cdc122city

Deaths in 122 U.S. cities - 1962-2016. 122 Cities Mortality Reporting System.

epiweek_dt()

epiweek_dt: Convert an CDC week number to a calendar date

flubase()

flubase: An internal function for taking the average of previous baseline seasons

fludiff()

fludiff: Compute excess mortality

fludta

Sample dataset for examples. Derived from CDC 122 cities dataset.

flugam()

flugam: compute influenza estimates using Generalized Additive Models from the mgcv package.

fluglm()

fluglm: Generate fitted prediction values with generalized linear model.

flum()

flum: General modeling function for Attributable Influenza Mortality

flunnet()

flunnet: Estimating attributable mortality with Neural Networks

fluplot()

fluplot: Convenience wrapper for standard trend plot

flurima()

flurima: ARIMA models applied to attributable mortality

fluserf()

fluserf: Fit a Serfling Model on Time Series Data

gam_fitvals()

gam_fitvals: extract fit values from glm fit object

glm_fitvals()

glm_fitvals: extract fit values from glm fit object

gr()

gr: Line graph for ird models

ilinet

CDC Outpatient Influenza Surveillance - ILINET

ird()

ird: Perform incidence rate-difference models

mk_flu_form()

mk_flu_form: Build model formula for internal use

nrevss

CDC WHO NREVSS Laboratory Data

rb()

rb: Compute differences in ird model

test_prop()

test_prop: Evaluate if numeric vector is a proportion